Easy enough to do using the Super Pike Ball as you're completely safe from Cyclops Plant's eye being able to slam on you when it rampages.
The lasers in the first phase will lock onto your position but then slowly trails forward a short distance. However the first phase doesn't have much health so once you get dodging down the rest is cake if you have a Super Pike Ball.
If you end up not having one a normal Pike Ball will do fine however you are very open to attack.
Pay attention to where the eye lands as if he is floating you can duck the laser but you'll need to jump over if he is laying on the ground.